Read me first! -- Tutorial : create a tree! -- Acquiring and aligning the sequences -- pt. 1. Major methods for estimating phylogenetic trees. Neighbor-joining trees -- Drawing phylogenetic trees -- ...
They include myRDP (align and classify 16S rRNA sequences), Tree Builder (create phylogenetic trees), Hierarchy Browser (for browsing phylogenetic hierarchies and compiling lists of 16S rRNAs), ...